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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0527610 |
| Transcript ID | Lj5g3v0527610.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 1-like isoform X1 [Cicer arietinum] gi|502177381|ref|XP_004516070.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 3 | 10 | 8 | – | – | |
| PANTHER | 8 | 87 | 80 | 4.40E-255 | – | |
| PANTHER | 8 | 87 | 80 | 4.40E-255 | – | |
| Phobius | 11 | 15 | 5 | – | – | |
| Phobius | 16 | 154 | 139 | – | – | |
| CDD | 22 | 451 | 430 | 9.18E-95 | – | |
| TIGRFAM | 29 | 375 | 347 | 6.40E-93 | ||
| PANTHER | 139 | 465 | 327 | 4.40E-255 | – | |
| PANTHER | 139 | 465 | 327 | 4.40E-255 | – | |
| Pfam | 153 | 243 | 91 | 4.00E-12 | ||
| Phobius | 155 | 178 | 24 | – | – | |
| TMHMM | 155 | 177 | 23 | – | – | |
| Phobius | 179 | 198 | 20 | – | – | |
| TMHMM | 197 | 216 | 20 | – | – | |
| Phobius | 199 | 220 | 22 | – | – | |
| Phobius | 221 | 225 | 5 | – | – | |
| Phobius | 226 | 248 | 23 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 249 | 254 | 6 | – | – | |
| Phobius | 255 | 275 | 21 | – | – | |
| TMHMM | 255 | 274 | 20 | – | – | |
| Phobius | 276 | 297 | 22 | – | – | |
| TMHMM | 297 | 319 | 23 | – | – | |
| Phobius | 298 | 319 | 22 | – | – | |
| Phobius | 320 | 330 | 11 | – | – | |
| Phobius | 331 | 359 | 29 | – | – | |
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 360 | 399 | 40 | – | – | |
| TMHMM | 400 | 422 | 23 | – | – | |
| Phobius | 400 | 421 | 22 | – | – | |
| Phobius | 422 | 427 | 6 | – | – | |
| Phobius | 428 | 449 | 22 | – | – | |
| TMHMM | 429 | 451 | 23 | – | – | |
| Phobius | 450 | 467 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0527610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0527610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.