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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0528840 |
| Transcript ID | Lj5g3v0528840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] gi|357451795|ref|XP_003596174.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 31 | 31 | 5 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 21 | 39 | 19 | – | – | |
| SUPERFAMILY | 28 | 152 | 125 | 1.51E-40 | – | |
| Gene3D | 29 | 152 | 124 | 9.80E-41 | ||
| Phobius | 40 | 139 | 100 | – | – | |
| PANTHER | 41 | 149 | 109 | 1.60E-75 | – | |
| PANTHER | 41 | 149 | 109 | 1.60E-75 | – | |
| ProSiteProfiles | 79 | 164 | 86 | 10.205 | ||
| Pfam | 84 | 152 | 69 | 1.10E-17 | ||
| Phobius | 140 | 163 | 24 | – | – | |
| Phobius | 164 | 164 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v0528840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0528840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.