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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0657200 |
| Transcript ID | Lj5g3v0657200.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | White-brown-complex ABC transporter family [Medicago truncatula] gi|357510759|ref|XP_003625668.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 1.10E-251 | – | |
| Phobius | 1 | 269 | 269 | – | – | |
| PANTHER | 1 | 167 | 167 | 1.10E-251 | – | |
| Gene3D | 9 | 124 | 116 | 1.20E-21 | ||
| Pfam | 10 | 62 | 53 | 2.00E-06 | ||
| SUPERFAMILY | 19 | 121 | 103 | 1.98E-20 | ||
| MobiDBLite | 193 | 213 | 21 | – | – | |
| PANTHER | 200 | 419 | 220 | 1.10E-251 | – | |
| PANTHER | 200 | 419 | 220 | 1.10E-251 | – | |
| TMHMM | 270 | 287 | 18 | – | – | |
| Phobius | 270 | 287 | 18 | – | – | |
| Phobius | 288 | 298 | 11 | – | – | |
| TMHMM | 294 | 316 | 23 | – | – | |
| Phobius | 299 | 316 | 18 | – | – | |
| Phobius | 317 | 322 | 6 | – | – | |
| Phobius | 323 | 339 | 17 | – | – | |
| Phobius | 340 | 389 | 50 | – | – | |
| Phobius | 390 | 415 | 26 | – | – | |
| TMHMM | 393 | 415 | 23 | – | – | |
| Phobius | 416 | 419 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj5g3v0657200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0657200.1, powered by CORGI.
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