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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0709800 |
| Transcript ID | Lj5g3v0709800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: delta(14)-sterol reductase-like [Cicer arietinum] gi|502122143|ref|XP_004497600.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 6 | 369 | 364 | 1.50E-181 | – | |
| Pfam | 17 | 369 | 353 | 1.50E-94 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 20 | 44 | 25 | – | – | |
| Phobius | 45 | 55 | 11 | – | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 56 | 76 | 21 | – | – | |
| Phobius | 77 | 87 | 11 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 88 | 106 | 19 | – | – | |
| Phobius | 107 | 146 | 40 | – | – | |
| ProSitePatterns | 123 | 138 | 16 | – | ||
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 147 | 165 | 19 | – | – | |
| Phobius | 166 | 176 | 11 | – | – | |
| Phobius | 177 | 193 | 17 | – | – | |
| TMHMM | 178 | 195 | 18 | – | – | |
| Phobius | 194 | 212 | 19 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 213 | 233 | 21 | – | – | |
| Phobius | 234 | 238 | 5 | – | – | |
| Phobius | 239 | 258 | 20 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 259 | 278 | 20 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Phobius | 279 | 296 | 18 | – | – | |
| Phobius | 297 | 307 | 11 | – | – | |
| Phobius | 308 | 336 | 29 | – | – | |
| TMHMM | 317 | 336 | 20 | – | – | |
| ProSitePatterns | 333 | 356 | 24 | – | ||
| Phobius | 337 | 369 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Sterol biosynthetic process | The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v0709800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0709800.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.