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Lj5g3v1097040.1

Overview

Field Value
Gene ID Lj5g3v1097040
Transcript ID Lj5g3v1097040.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Serine/threonine protein kinase [Medicago truncatula] gi|357513353|ref|XP_003626965.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27002
1 276 276 1.60E-204 –
Pfam
PF07714
1 228 228 6.00E-40
IPR001245
SMART
SM00220
1 252 252 2.00E-10
IPR000719
ProSiteProfiles
PS50011
1 235 235 30.817
IPR000719
PANTHER
PTHR27002:SF157
1 276 276 1.60E-204 –
Gene3D
G3DSA:3.30.200.20
1 35 35 5.10E-11 –
SUPERFAMILY
SSF56112
1 250 250 2.83E-65
IPR011009
Gene3D
G3DSA:1.10.510.10
36 234 199 2.10E-41 –
ProSitePatterns
PS00108
80 92 13 –
IPR008271
MobiDBLite
mobidb-lite
254 278 25 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj5g3v1097040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1097040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.