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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1118430 |
| Transcript ID | Lj5g3v1118430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 7A-like [Glycine max] gi|356537136|ref|XP_003537086.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 710 | 684 | 0 | – | |
| PANTHER | 27 | 710 | 684 | 0 | – | |
| MobiDBLite | 35 | 55 | 21 | – | – | |
| SMART | 133 | 166 | 34 | 180 | ||
| Gene3D | 134 | 224 | 91 | 3.40E-04 | ||
| Gene3D | 318 | 344 | 27 | 3.40E-04 | ||
| Gene3D | 418 | 706 | 289 | 6.40E-30 | ||
| SUPERFAMILY | 418 | 540 | 123 | 7.78E-07 | ||
| ProSiteProfiles | 440 | 544 | 105 | 6.633 | ||
| SMART | 440 | 473 | 34 | 100 | ||
| Pfam | 448 | 504 | 57 | 0.0025 | – | |
| SMART | 475 | 508 | 34 | 50 | ||
| SMART | 511 | 544 | 34 | 97 | ||
| SUPERFAMILY | 513 | 704 | 192 | 1.14E-17 | ||
| ProSiteProfiles | 567 | 600 | 34 | 6.933 | ||
| SMART | 567 | 600 | 34 | 12 | ||
| ProSiteProfiles | 567 | 707 | 141 | 16.469 | ||
| ProSiteProfiles | 601 | 634 | 34 | 10.738 | ||
| SMART | 601 | 634 | 34 | 0.0032 | ||
| Pfam | 603 | 634 | 32 | 1.30E-04 | ||
| SMART | 671 | 707 | 37 | 56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1118430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1118430.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.