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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1174510 |
| Transcript ID | Lj5g3v1174510.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Putative transporter [Aegilops tauschii] gi|475377922|gb|EMT00616.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 2 | 318 | 317 | 2.90E-162 | – | |
| PANTHER | 2 | 318 | 317 | 2.90E-162 | – | |
| Phobius | 6 | 29 | 24 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Pfam | 10 | 317 | 308 | 1.70E-48 | ||
| Phobius | 30 | 40 | 11 | – | – | |
| Phobius | 41 | 61 | 21 | – | – | |
| Phobius | 62 | 72 | 11 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 73 | 94 | 22 | – | – | |
| Phobius | 95 | 105 | 11 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 126 | 21 | – | – | |
| Phobius | 127 | 145 | 19 | – | – | |
| Phobius | 146 | 165 | 20 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 166 | 318 | 153 | – | – | |
| TMHMM | 258 | 280 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1174510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1174510.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.