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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1175630 |
| Transcript ID | Lj5g3v1175630.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tetratricopeptide repeat protein 7B [Medicago truncatula] gi|357441063|ref|XP_003590809.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 395 | 395 | 7.10E-227 | – | |
| PANTHER | 1 | 395 | 395 | 7.10E-227 | – | |
| SMART | 4 | 37 | 34 | 360 | ||
| SUPERFAMILY | 106 | 225 | 120 | 4.93E-05 | ||
| Gene3D | 108 | 390 | 283 | 1.90E-25 | ||
| SMART | 161 | 194 | 34 | 170 | ||
| Coils | 199 | 219 | 21 | – | – | |
| SUPERFAMILY | 247 | 368 | 122 | 1.07E-16 | ||
| SMART | 253 | 286 | 34 | 1.7 | ||
| ProSiteProfiles | 253 | 286 | 34 | 7.08 | ||
| ProSiteProfiles | 253 | 392 | 140 | 18.76 | ||
| ProSiteProfiles | 287 | 320 | 34 | 11.623 | ||
| SMART | 287 | 320 | 34 | 0.0056 | ||
| Pfam | 290 | 320 | 31 | 0.098 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1175630.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1175630.2, powered by CORGI.
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