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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1314550 |
| Transcript ID | Lj5g3v1314550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ammonium transporter [Lotus japonicus] gi|31322044|gb|AAM95453.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 27 | 12 | – | – | |
| PANTHER | 21 | 517 | 497 | 0 | – | |
| PANTHER | 21 | 517 | 497 | 0 | ||
| Phobius | 28 | 50 | 23 | – | – | |
| Gene3D | 44 | 458 | 415 | 2.80E-119 | ||
| SUPERFAMILY | 46 | 458 | 413 | 5.75E-101 | ||
| TIGRFAM | 49 | 477 | 429 | 1.80E-143 | ||
| Phobius | 51 | 75 | 25 | – | – | |
| Pfam | 52 | 477 | 426 | 2.70E-136 | ||
| TMHMM | 53 | 75 | 23 | – | – | |
| Phobius | 76 | 95 | 20 | – | – | |
| TMHMM | 95 | 117 | 23 | – | – | |
| Phobius | 96 | 115 | 20 | – | – | |
| Phobius | 116 | 134 | 19 | – | – | |
| TMHMM | 132 | 154 | 23 | – | – | |
| Phobius | 135 | 153 | 19 | – | – | |
| Phobius | 154 | 159 | 6 | – | – | |
| Phobius | 160 | 182 | 23 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 183 | 201 | 19 | – | – | |
| Phobius | 202 | 226 | 25 | – | – | |
| TMHMM | 203 | 225 | 23 | – | – | |
| ProSitePatterns | 205 | 230 | 26 | – | ||
| Phobius | 227 | 246 | 20 | – | – | |
| TMHMM | 246 | 265 | 20 | – | – | |
| Phobius | 247 | 265 | 19 | – | – | |
| Phobius | 266 | 347 | 82 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 348 | 368 | 21 | – | – | |
| Phobius | 369 | 379 | 11 | – | – | |
| Phobius | 380 | 398 | 19 | – | – | |
| TMHMM | 382 | 404 | 23 | – | – | |
| Phobius | 399 | 424 | 26 | – | – | |
| Phobius | 425 | 448 | 24 | – | – | |
| TMHMM | 428 | 450 | 23 | – | – | |
| Phobius | 449 | 518 | 70 | – | – | |
| MobiDBLite | 497 | 518 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj5g3v1314550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1314550.1, powered by CORGI.
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