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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1314560 |
| Transcript ID | Lj5g3v1314560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ammonium transporter [Lotus japonicus] gi|31322044|gb|AAM95453.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 396 | 396 | 9.90E-113 | ||
| SUPERFAMILY | 1 | 396 | 396 | 1.44E-95 | ||
| Pfam | 1 | 415 | 415 | 2.10E-133 | ||
| TIGRFAM | 1 | 415 | 415 | 1.50E-137 | ||
| PANTHER | 1 | 455 | 455 | 0 | ||
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 1 | 455 | 455 | 0 | – | |
| Phobius | 3 | 10 | 8 | – | – | |
| Phobius | 11 | 15 | 5 | – | – | |
| Phobius | 16 | 71 | 56 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 72 | 91 | 20 | – | – | |
| TMHMM | 73 | 92 | 20 | – | – | |
| Phobius | 92 | 97 | 6 | – | – | |
| Phobius | 98 | 120 | 23 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 121 | 139 | 19 | – | – | |
| Phobius | 140 | 164 | 25 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| ProSitePatterns | 143 | 168 | 26 | – | ||
| Phobius | 165 | 184 | 20 | – | – | |
| TMHMM | 184 | 203 | 20 | – | – | |
| Phobius | 185 | 203 | 19 | – | – | |
| Phobius | 204 | 285 | 82 | – | – | |
| TMHMM | 229 | 251 | 23 | – | – | |
| TMHMM | 258 | 280 | 23 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Phobius | 286 | 306 | 21 | – | – | |
| Phobius | 307 | 317 | 11 | – | – | |
| Phobius | 318 | 336 | 19 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 337 | 362 | 26 | – | – | |
| Phobius | 363 | 386 | 24 | – | – | |
| TMHMM | 366 | 388 | 23 | – | – | |
| Phobius | 387 | 456 | 70 | – | – | |
| MobiDBLite | 435 | 456 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj5g3v1314560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1314560.1, powered by CORGI.
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