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Lj5g3v1598370.1

Overview

Field Value
Gene ID Lj5g3v1598370
Transcript ID Lj5g3v1598370.1
Lotus japonicus genome version MG20 v3.0
Description Pectinesterase inhibitor [Medicago truncatula] gi|357442221|ref|XP_003591388.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles 1 22 22 6
Phobius 1 24 24
SignalP 1 26 26
SignalP 1 24 24
Phobius 1 8 8
SignalP 1 37 37
PANTHER 6 39 34 1.70E-35
Phobius 9 20 12
Phobius 21 24 4
Phobius 25 215 191
TIGRFAM 49 209 161 2.00E-23
SMART 59 205 147 5.90E-20
CDD 61 209 149 2.70E-35
PANTHER 61 212 152 1.70E-35
SUPERFAMILY 62 210 149 1.16E-25
Gene3D 63 210 148 3.80E-24
Pfam 64 205 142 5.50E-18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj5g3v1598370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1598370.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.