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Lj5g3v1665180.1

Overview

Field Value
Gene ID Lj5g3v1665180
Transcript ID Lj5g3v1665180.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356557333|ref|XP_003546971.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017
1 438 438 5.50E-185 –
PANTHER
PTHR11017:SF162
1 438 438 5.50E-185 –
SUPERFAMILY
SSF52540
3 214 212 1.14E-45
IPR027417
Pfam
PF00931
5 54 50 3.10E-06
IPR002182
Gene3D
G3DSA:3.40.50.300
14 81 68 1.30E-06
IPR027417
PRINTS
PR00364
17 32 16 2.30E-18 –
Pfam
PF00931
86 221 136 1.80E-15
IPR002182
PRINTS
PR00364
155 169 15 2.30E-18 –
SUPERFAMILY
SSF46785
191 296 106 3.26E-07
IPR011991
SUPERFAMILY
SSF52058
304 611 308 1.36E-42
IPR032675
Gene3D
G3DSA:3.80.10.10
320 603 284 9.10E-35
IPR032675
PRINTS
PR00364
404 420 17 2.30E-18 –
PANTHER
PTHR11017:SF162
510 678 169 5.50E-185 –
PANTHER
PTHR11017
510 678 169 5.50E-185 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj5g3v1665180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1665180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.