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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1696740 |
| Transcript ID | Lj5g3v1696740.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508702969|gb|EOX94865.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | – | – | |
| PANTHER | 15 | 1858 | 1844 | 0 | ||
| PANTHER | 15 | 1858 | 1844 | 0 | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 31 | 49 | 19 | – | – | |
| Phobius | 50 | 54 | 5 | – | – | |
| TMHMM | 55 | 74 | 20 | – | – | |
| Phobius | 55 | 74 | 20 | – | – | |
| Phobius | 75 | 85 | 11 | – | – | |
| Phobius | 86 | 109 | 24 | – | – | |
| TMHMM | 87 | 109 | 23 | – | – | |
| Phobius | 110 | 128 | 19 | – | – | |
| TMHMM | 129 | 146 | 18 | – | – | |
| Phobius | 129 | 146 | 18 | – | – | |
| Phobius | 147 | 182 | 36 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 183 | 204 | 22 | – | – | |
| Phobius | 205 | 223 | 19 | – | – | |
| Phobius | 224 | 241 | 18 | – | – | |
| Phobius | 242 | 252 | 11 | – | – | |
| Phobius | 253 | 270 | 18 | – | – | |
| Phobius | 271 | 275 | 5 | – | – | |
| Phobius | 276 | 293 | 18 | – | – | |
| Phobius | 294 | 414 | 121 | – | – | |
| Phobius | 415 | 433 | 19 | – | – | |
| Phobius | 434 | 438 | 5 | – | – | |
| TMHMM | 439 | 461 | 23 | – | – | |
| Phobius | 439 | 467 | 29 | – | – | |
| Phobius | 468 | 473 | 6 | – | – | |
| TMHMM | 474 | 493 | 20 | – | – | |
| Phobius | 474 | 493 | 20 | – | – | |
| Phobius | 494 | 537 | 44 | – | – | |
| TMHMM | 538 | 555 | 18 | – | – | |
| Phobius | 538 | 555 | 18 | – | – | |
| Phobius | 556 | 598 | 43 | – | – | |
| TMHMM | 597 | 619 | 23 | – | – | |
| Phobius | 599 | 617 | 19 | – | – | |
| Phobius | 618 | 622 | 5 | – | – | |
| Phobius | 623 | 640 | 18 | – | – | |
| TMHMM | 623 | 640 | 18 | – | – | |
| Phobius | 641 | 651 | 11 | – | – | |
| TMHMM | 652 | 671 | 20 | – | – | |
| Phobius | 652 | 669 | 18 | – | – | |
| Phobius | 670 | 698 | 29 | – | – | |
| Phobius | 699 | 720 | 22 | – | – | |
| TMHMM | 703 | 725 | 23 | – | – | |
| Phobius | 721 | 1005 | 285 | – | – | |
| Coils | 760 | 783 | 24 | – | – | |
| TMHMM | 1006 | 1028 | 23 | – | – | |
| Phobius | 1006 | 1032 | 27 | – | – | |
| Phobius | 1033 | 1043 | 11 | – | – | |
| TMHMM | 1043 | 1060 | 18 | – | – | |
| Phobius | 1044 | 1064 | 21 | – | – | |
| Phobius | 1065 | 1093 | 29 | – | – | |
| TMHMM | 1093 | 1115 | 23 | – | – | |
| Phobius | 1094 | 1114 | 21 | – | – | |
| Phobius | 1115 | 1148 | 34 | – | – | |
| Phobius | 1149 | 1168 | 20 | – | – | |
| TMHMM | 1149 | 1168 | 20 | – | – | |
| Phobius | 1169 | 1313 | 145 | – | – | |
| Phobius | 1314 | 1337 | 24 | – | – | |
| TMHMM | 1315 | 1337 | 23 | – | – | |
| Phobius | 1338 | 1356 | 19 | – | – | |
| Phobius | 1357 | 1377 | 21 | – | – | |
| TMHMM | 1357 | 1379 | 23 | – | – | |
| Phobius | 1378 | 1383 | 6 | – | – | |
| TMHMM | 1384 | 1401 | 18 | – | – | |
| Phobius | 1384 | 1403 | 20 | – | – | |
| Phobius | 1404 | 1414 | 11 | – | – | |
| Phobius | 1415 | 1439 | 25 | – | – | |
| TMHMM | 1416 | 1438 | 23 | – | – | |
| Phobius | 1440 | 1527 | 88 | – | – | |
| Pfam | 1467 | 1856 | 390 | 9.60E-111 | ||
| Phobius | 1528 | 1549 | 22 | – | – | |
| TMHMM | 1529 | 1551 | 23 | – | – | |
| Phobius | 1550 | 1775 | 226 | – | – | |
| Phobius | 1776 | 1793 | 18 | – | – | |
| TMHMM | 1776 | 1793 | 18 | – | – | |
| Phobius | 1794 | 1858 | 65 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Mechanosensitive ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens in response to a mechanical stress. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v1696740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1696740.1, powered by CORGI.
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