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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1796800 |
| Transcript ID | Lj5g3v1796800.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 33 homolog [Cicer arietinum] gi|502118380|ref|XP_004496238.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 542 | 542 | – | – | |
| PANTHER | 4 | 570 | 567 | 1.30E-250 | ||
| PANTHER | 4 | 570 | 567 | 1.30E-250 | ||
| SUPERFAMILY | 4 | 568 | 565 | 5.36E-118 | ||
| Pfam | 36 | 568 | 533 | 7.60E-107 | ||
| Gene3D | 144 | 242 | 99 | 1.90E-13 | ||
| Gene3D | 243 | 351 | 109 | 6.40E-16 | – | |
| Gene3D | 476 | 568 | 93 | 1.90E-13 | ||
| Phobius | 543 | 564 | 22 | – | – | |
| TMHMM | 543 | 565 | 23 | – | – | |
| Phobius | 565 | 571 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle docking involved in exocytosis | The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj5g3v1796800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1796800.1, powered by CORGI.
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