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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1811660 |
| Transcript ID | Lj5g3v1811660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pleckstrin (PH) and lipid-binding START domains-containing protein [Theobroma cacao] gi|508726768|gb|EOY18665.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 7 | 115 | 109 | 10.941 | ||
| PANTHER | 7 | 726 | 720 | 0 | – | |
| PANTHER | 7 | 726 | 720 | 0 | – | |
| Gene3D | 7 | 114 | 108 | 4.00E-10 | ||
| SUPERFAMILY | 7 | 115 | 109 | 2.66E-11 | ||
| SMART | 8 | 117 | 110 | 1.70E-09 | ||
| Pfam | 9 | 113 | 105 | 1.30E-08 | ||
| CDD | 10 | 110 | 101 | 1.10E-07 | – | |
| SMART | 157 | 363 | 207 | 2.40E-08 | ||
| SUPERFAMILY | 159 | 334 | 176 | 1.04E-37 | – | |
| CDD | 160 | 361 | 202 | 4.88E-40 | – | |
| Gene3D | 162 | 361 | 200 | 9.10E-40 | ||
| ProSiteProfiles | 172 | 346 | 175 | 23.819 | ||
| Pfam | 202 | 341 | 140 | 1.20E-17 | ||
| Pfam | 513 | 720 | 208 | 1.60E-67 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of Lj5g3v1811660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1811660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.