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Lj5g3v1950920.1

Overview

Field Value
Gene ID Lj5g3v1950920
Transcript ID Lj5g3v1950920.1
Lotus japonicus genome version MG20 v3.0
Description fructose-1,6-bisphosphatase [Pisum sativum] gi|5305145|emb|CAB46084.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11556:SF17
1 324 324 3.80E-249 –
PIRSF
PIRSF500210
1 326 326 3.20E-119
IPR028343
Pfam
PF00316
1 188 188 5.60E-78
IPR033391
PIRSF
PIRSF000904
1 327 327 6.80E-116
IPR000146
PANTHER
PTHR11556
1 324 324 3.80E-249
IPR000146
Hamap
MF_01855
1 323 323 40.249
IPR000146
ProSiteProfiles
PS51257
1 32 32 5 –
SUPERFAMILY
SSF56655
1 321 321 4.93E-113 –
Gene3D
G3DSA:3.30.540.10
1 189 189 7.60E-79 –
CDD
cd00354
8 321 314 0
IPR000146
PRINTS
PR00115
26 53 28 4.10E-70
IPR028343
PRINTS
PR00115
63 89 27 4.10E-70
IPR028343
PRINTS
PR00115
142 165 24 4.10E-70
IPR028343
PRINTS
PR00115
173 196 24 4.10E-70
IPR028343
Gene3D
G3DSA:3.40.190.80
190 322 133 1.50E-58 –
PRINTS
PR00115
199 226 28 4.10E-70
IPR028343
ProSitePatterns
PS00124
263 275 13 –
IPR020548
PRINTS
PR00115
297 322 26 4.10E-70
IPR028343

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of
GO:0042132
Molecular function Fructose 1,6-bisphosphate 1-phosphatase activity Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.
Subterm of
GO:0042578
Molecular function Phosphoric ester hydrolase activity Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj5g3v1950920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1950920.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.