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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2013630 |
| Transcript ID | Lj5g3v2013630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA-binding protein HEXBP-like [Cicer arietinum] gi|502119274|ref|XP_004496562.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 240 | 240 | 4.00E-117 | – | |
| PANTHER | 1 | 240 | 240 | 4.00E-117 | – | |
| MobiDBLite | 1 | 67 | 67 | – | – | |
| SUPERFAMILY | 67 | 116 | 50 | 1.03E-07 | ||
| Gene3D | 71 | 105 | 35 | 6.30E-09 | ||
| Pfam | 74 | 89 | 16 | 3.1 | ||
| SMART | 74 | 90 | 17 | 0.017 | ||
| Pfam | 98 | 114 | 17 | 0.1 | ||
| SMART | 99 | 115 | 17 | 0.028 | ||
| ProSiteProfiles | 100 | 115 | 16 | 9.257 | ||
| Gene3D | 106 | 131 | 26 | 4.30E-10 | ||
| SUPERFAMILY | 119 | 170 | 52 | 4.35E-11 | ||
| SMART | 125 | 141 | 17 | 0.0067 | ||
| ProSiteProfiles | 126 | 141 | 16 | 10.23 | ||
| Pfam | 126 | 141 | 16 | 1.20E-04 | ||
| Gene3D | 132 | 158 | 27 | 4.70E-12 | ||
| SMART | 152 | 168 | 17 | 7.70E-04 | ||
| Pfam | 153 | 168 | 16 | 1.50E-04 | ||
| ProSiteProfiles | 153 | 168 | 16 | 9.603 | ||
| Gene3D | 159 | 195 | 37 | 1.70E-11 | ||
| Pfam | 179 | 194 | 16 | 0.21 | ||
| SMART | 179 | 195 | 17 | 0.031 | ||
| MobiDBLite | 211 | 266 | 56 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj5g3v2013630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2013630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.