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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2015060 |
| Transcript ID | Lj5g3v2015060.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max] gi|356575939|ref|XP_003556093.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 505 | 505 | 0 | – | |
| PANTHER | 1 | 505 | 505 | 0 | – | |
| Gene3D | 13 | 136 | 124 | 3.20E-51 | ||
| SUPERFAMILY | 14 | 271 | 258 | 1.11E-47 | ||
| Pfam | 14 | 75 | 62 | 5.80E-07 | ||
| ProSiteProfiles | 44 | 259 | 216 | 37.162 | ||
| ProSiteProfiles | 44 | 76 | 33 | 14.559 | ||
| SMART | 44 | 73 | 30 | 1.70E-05 | ||
| CDD | 46 | 196 | 151 | 4.74E-29 | – | |
| SMART | 77 | 106 | 30 | 6.5 | ||
| Pfam | 82 | 202 | 121 | 2.50E-14 | ||
| ProSiteProfiles | 111 | 132 | 22 | 8.923 | ||
| SMART | 111 | 141 | 31 | 1.9 | ||
| Gene3D | 168 | 265 | 98 | 3.20E-51 | ||
| CDD | 170 | 265 | 96 | 3.27E-19 | – | |
| SMART | 175 | 204 | 30 | 1.30E-05 | ||
| ProSiteProfiles | 175 | 207 | 33 | 11.861 | ||
| Pfam | 218 | 265 | 48 | 4.30E-07 | ||
| SMART | 218 | 247 | 30 | 3.80E-04 | ||
| ProSiteProfiles | 218 | 250 | 33 | 11.06 | ||
| SUPERFAMILY | 311 | 373 | 63 | 8.58E-07 | – | |
| ProSiteProfiles | 317 | 367 | 51 | 9.258 | ||
| ProSitePatterns | 332 | 341 | 10 | – | ||
| MobiDBLite | 451 | 479 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2015060.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2015060.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.