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Lj5g3v2029610.1

Overview

Field Value
Gene ID Lj5g3v2029610
Transcript ID Lj5g3v2029610.1
Lotus japonicus genome version MG20 v3.0
Description Fructokinase [Medicago truncatula] gi|357444145|ref|XP_003592350.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10584:SF200
6 339 334 4.40E-265 –
PANTHER
PTHR10584
6 339 334 4.40E-265 –
Gene3D
G3DSA:3.40.1190.20
21 339 319 2.90E-99
IPR029056
CDD
cd01167
24 326 303 1.94E-129 –
Pfam
PF00294
24 331 308 5.70E-79
IPR011611
SUPERFAMILY
SSF53613
25 338 314 2.34E-86
IPR029056
PRINTS
PR00990
50 69 20 3.30E-07
IPR002139
ProSitePatterns
PS00583
55 79 25 –
IPR002173
PRINTS
PR00990
205 220 16 3.30E-07
IPR002139
PRINTS
PR00990
247 258 12 3.30E-07
IPR002139
ProSitePatterns
PS00584
276 289 14 –
IPR002173

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj5g3v2029610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2029610.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.