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Lj5g3v2030870.1

Overview

Field Value
Gene ID Lj5g3v2030870
Transcript ID Lj5g3v2030870.1
Lotus japonicus genome version MG20 v3.0
Description Mitogen-activated protein kinase [Medicago truncatula] gi|357444219|ref|XP_003592387.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 470 470 21.757
IPR000719
PANTHER
PTHR27003
6 130 125 7.10E-140 –
SMART
SM00220
6 461 456 1.30E-09
IPR000719
PANTHER
PTHR27003:SF86
6 130 125 7.10E-140 –
Pfam
PF07714
10 130 121 9.50E-17
IPR001245
SUPERFAMILY
SSF56112
11 123 113 3.56E-47
IPR011009
Gene3D
G3DSA:1.10.510.10
55 132 78 9.30E-40 –
ProSitePatterns
PS00108
97 109 13 –
IPR008271
MobiDBLite
mobidb-lite
134 155 22 – –
Coils
Coil
260 280 21 – –
SUPERFAMILY
SSF56112
338 469 132 3.56E-47
IPR011009
Pfam
PF00069
345 458 114 9.30E-08
IPR000719
Gene3D
G3DSA:1.10.510.10
347 475 129 9.30E-40 –
PANTHER
PTHR27003
348 461 114 7.10E-140 –
PANTHER
PTHR27003:SF86
348 461 114 7.10E-140 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj5g3v2030870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2030870.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.