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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2060720 |
| Transcript ID | Lj5g3v2060720.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dnaJ homolog subfamily C member 25-like [Glycine max] gi|356536059|ref|XP_003536558.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 13 | 24 | 12 | – | – | |
| PANTHER | 13 | 158 | 146 | 2.20E-84 | – | |
| PANTHER | 13 | 158 | 146 | 2.20E-84 | – | |
| Phobius | 25 | 32 | 8 | – | – | |
| Phobius | 33 | 305 | 273 | – | – | |
| Gene3D | 33 | 122 | 90 | 1.20E-24 | ||
| SUPERFAMILY | 34 | 110 | 77 | 7.07E-25 | ||
| SMART | 38 | 95 | 58 | 1.10E-23 | ||
| ProSiteProfiles | 39 | 103 | 65 | 19.003 | ||
| Pfam | 39 | 100 | 62 | 7.10E-23 | ||
| CDD | 39 | 92 | 54 | 2.92E-20 | ||
| PRINTS | 41 | 59 | 19 | 5.70E-16 | ||
| PRINTS | 59 | 74 | 16 | 5.70E-16 | ||
| PRINTS | 75 | 95 | 21 | 5.70E-16 | ||
| ProSitePatterns | 80 | 99 | 20 | – | ||
| TMHMM | 127 | 144 | 18 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| PANTHER | 232 | 298 | 67 | 2.20E-84 | – | |
| PANTHER | 232 | 298 | 67 | 2.20E-84 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2060720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2060720.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.