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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2110830 |
| Transcript ID | Lj5g3v2110830.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: PXMP2/4 family protein 4-like [Cicer arietinum] gi|502120220|ref|XP_004496888.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 122 | 122 | – | – | |
| PANTHER | 15 | 255 | 241 | 5.40E-134 | ||
| PANTHER | 15 | 255 | 241 | 5.40E-134 | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 123 | 142 | 20 | – | – | |
| Phobius | 143 | 161 | 19 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 162 | 179 | 18 | – | – | |
| Phobius | 180 | 198 | 19 | – | – | |
| Pfam | 183 | 241 | 59 | 1.20E-15 | ||
| TMHMM | 199 | 221 | 23 | – | – | |
| Phobius | 199 | 221 | 23 | – | – | |
| Phobius | 222 | 226 | 5 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 227 | 247 | 21 | – | – | |
| Phobius | 248 | 257 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v2110830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2110830.1, powered by CORGI.
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