Domain Predictions — View

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PF04117

Source: Pfam

Description

Mpv17 / PMP22 family

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016021 View details of GO:0016021 AmiGO InterPro QuickGO	Cellular component	Integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.	Subterm of GO:0031224

Associated Lotus transcripts 23

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0004019.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: PXMP2/4 family protein 4-like [Cicer arietinum] gi\|502093311\|ref\|XP_004489899.1\|	Domains IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF43 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
Lj0g3v0260519.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein Mpv17 [Medicago truncatula] gi\|357474433\|ref\|XP_003607501.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF37 TMhelix TRANSMEMBRANE	8
Lj0g3v0341989.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peroxisomal membrane protein PMP22-like [Cicer arietinum] gi\|502116258\|ref\|XP_004495354.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF15 TMhelix TRANSMEMBRANE	8
Lj3g3v0669020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane Mpv17/PMP22 family protein [Arabidopsis thaliana] gi\|30695366\|ref\|NP_564615.3\|	Domains IPR007248 PF04117 PTHR11266 PTHR11266:SF16 mobidb-lite	5
Lj3g3v2781610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein SYM1-like isoform X2 [Cicer arietinum] gi\|502082915\|ref\|XP_004487311.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF16 TRANSMEMBRANE mobidb-lite	8
Lj4g3v2679650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: PXMP2/4 family protein 2-like [Cicer arietinum] gi\|502124459\|ref\|XP_004498538.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
Lj5g3v2110830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: PXMP2/4 family protein 4-like [Cicer arietinum] gi\|502120220\|ref\|XP_004496888.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF18 TMhelix TRANSMEMBRANE	8
Lj6g3v1827400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: peroxisomal membrane protein PMP22-like [Cicer arietinum] gi\|502079160\|ref\|XP_004486173.1\|	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF15 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0226100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54XX9\|PX24B_DICDI PXMP2/4 family protein 2; TrEMBL-Plants: tr\|I3SSU2\|I3SSU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0226100	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0226100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54XX9\|PX24B_DICDI PXMP2/4 family protein 2; TrEMBL-Plants: tr\|I3SSU2\|I3SSU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0226100	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0226100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54XX9\|PX24B_DICDI PXMP2/4 family protein 2; TrEMBL-Plants: tr\|I3SSU2\|I3SSU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0226100	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0226100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54XX9\|PX24B_DICDI PXMP2/4 family protein 2; TrEMBL-Plants: tr\|I3SSU2\|I3SSU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0226100	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0656600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane MPV17/PMP22-like protein; TAIR: AT5G19750.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q7SCY7\|SYM1_NEUCR Protein sym-1; TrEMBL-Plants: tr\|A0A151TAQ5\|A0A151TAQ5_CAJCA Protein sym-1; Found in the gene: LotjaGi1g1v0656600	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF80 TMhelix TRANSMEMBRANE	8
LotjaGi2g1v0099700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT5G43140.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54FR4\|PX24D_DICDI PXMP2/4 family protein 4; TrEMBL-Plants: tr\|I3SB40\|I3SB40_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0099700	Domains IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF88 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
LotjaGi3g1v0077400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane (Mpv17/PMP22) family protein; TAIR: AT1G52870.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q2KIY1\|PXMP2_BOVIN Peroxisomal membrane protein 2; TrEMBL-Plants: tr\|I1LUX5\|I1LUX5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0077400	Domains IPR007248 PF04117 PTHR11266 PTHR11266:SF16 mobidb-lite	5
LotjaGi3g1v0442100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane (Mpv17/PMP22) family protein; TAIR: AT4G03410.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q754F0\|SYM1_ASHGO Protein SYM1; TrEMBL-Plants: tr\|A0A072VBB5\|A0A072VBB5_MEDTR Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Found in the gene: LotjaGi3g1v0442100	Domains IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF76 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM mobidb-lite	11
LotjaGi3g1v0451400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT2G42770.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q5TZ51\|MPV17_DANRE Protein Mpv17; TrEMBL-Plants: tr\|G7JTW9\|G7JTW9_MEDTR Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Found in the gene: LotjaGi3g1v0451400	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF91 TMhelix TRANSMEMBRANE	8
LotjaGi4g1v0449100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q4IPX8\|SYM1_GIBZE Protein SYM1; TrEMBL-Plants: tr\|A0A0B2SAA1\|A0A0B2SAA1_GLYSO Protein sym-1; Found in the gene: LotjaGi4g1v0449100	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF35 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0188300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane protein PMP22; TAIR: AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q9ZS51\|PMP22_ARATH Peroxisomal membrane protein PMP22; TrEMBL-Plants: tr\|I3SAV9\|I3SAV9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0188300	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF46 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0188300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane protein PMP22; TAIR: AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q9ZS51\|PMP22_ARATH Peroxisomal membrane protein PMP22; TrEMBL-Plants: tr\|I3SAV9\|I3SAV9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0188300	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF46 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0188300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane protein PMP22; TAIR: AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q9ZS51\|PMP22_ARATH Peroxisomal membrane protein PMP22; TrEMBL-Plants: tr\|I3SAV9\|I3SAV9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0188300	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF46 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0323800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; TAIR: AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q54FR4\|PX24D_DICDI PXMP2/4 family protein 4; TrEMBL-Plants: tr\|I1LEF9\|I1LEF9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0323800	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF18 TRANSMEMBRANE	7
LotjaGi6g1v0292800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peroxisomal membrane MPV17/PMP22-like protein; TAIR: AT4G04470.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Swiss-Prot: sp\|Q9ZS51\|PMP22_ARATH Peroxisomal membrane protein PMP22; TrEMBL-Plants: tr\|A0A151T6U9\|A0A151T6U9_CAJCA Peroxisomal membrane protein PMP22; Found in the gene: LotjaGi6g1v0292800	Domains CYTOPLASMIC_DOMAIN IPR007248 NON_CYTOPLASMIC_DOMAIN PF04117 PTHR11266 PTHR11266:SF86 TMhelix TRANSMEMBRANE	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	4.35