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Lj5g3v2110870.1

Overview

Field Value
Gene ID Lj5g3v2110870
Transcript ID Lj5g3v2110870.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359806787|ref|NP_001241049.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
3 109 107 3.80E-36 –
PANTHER
PTHR27001:SF1
3 109 107 3.80E-36
IPR031048
Gene3D
G3DSA:3.80.10.10
7 110 104 2.60E-28
IPR032675
SUPERFAMILY
SSF52058
8 111 104 9.07E-25
IPR032675
Pfam
PF13855
27 85 59 2.60E-09
IPR001611
PRINTS
PR00019
51 64 14 7.40E-05 –
PRINTS
PR00019
72 85 14 7.40E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004675
Molecular function Transmembrane receptor protein serine/threonine kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005102
Molecular function Signaling receptor binding Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj5g3v2110870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2110870.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.