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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031048
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We have found 29 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.312s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
3 GO terms
Lj0g3v0241899.1
n.a. somatic embryogenesis receptor kinase 1 [Citrus unshiu] gi|50657183|dbj|BAD32780.1| chr0 125518458 125520229 -
2 domain predictions
3 GO terms
Lj2g3v2985960.1
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359807462|ref|NP_001241394.1| chr2 38538567 38541940 -
2 domain predictions
3 GO terms
Lj2g3v2985970.1
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359807462|ref|NP_001241394.1| chr2 38544911 38547191 -
2 domain predictions
3 GO terms
Lj4g3v0338120.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr4 4277125 4280638 +
2 domain predictions
3 GO terms
Lj4g3v0338130.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Cicer arietinum] gi|502077101|ref|XP_004485552.1| chr4 4278710 4281190 +
2 domain predictions
3 GO terms
Lj4g3v0338160.1
n.a. Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activationgi|422919080|pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1] gi|388325711|pdb|3UIM|A chr4 4281141 4281816 +
2 domain predictions
3 GO terms
Lj4g3v0338170.1
n.a. somatic embryogenesis receptor-like kinase-like protein precursor [Glycine max] gi|351726874|ref|NP_001237909.1| chr4 4281804 4283379 +
2 domain predictions
3 GO terms
Lj5g3v1749340.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr5 25053929 25056931 -
2 domain predictions
3 GO terms
Lj5g3v1749340.3
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr5 25053929 25060627 -
2 domain predictions
3 GO terms
Lj5g3v1875170.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr5 26834164 26839717 +
2 domain predictions
3 GO terms
Lj5g3v2110870.1
n.a. somatic embryogenesis receptor kinase 1-like precursor [Glycine max] gi|359806787|ref|NP_001241049.1| chr5 30176038 30177576 -
2 domain predictions
3 GO terms
Lj6g3v2218740.1
n.a. Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activationgi|422919080|pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1] gi|388325711|pdb|3UIM|A chr6 25871663 25872338 -
2 domain predictions
3 GO terms
Lj6g3v2218770.1
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr6 25872841 25876354 -
2 domain predictions
3 GO terms
LotjaGi2g1v0096200.1
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|I1JD93|I1JD93_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 LjG1.1_chr2 31482351 31492446 -
2 domain predictions
3 GO terms
LotjaGi2g1v0096200.2
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A1J7FTK8|A0A1J7FTK8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 LjG1.1_chr2 31483471 31489666 -
2 domain predictions
3 GO terms
LotjaGi2g1v0096200.3
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A1J7FTK8|A0A1J7FTK8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 LjG1.1_chr2 31483471 31489811 -
2 domain predictions
3 GO terms
LotjaGi2g1v0096200.4
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A1J7FTK8|A0A1J7FTK8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 LjG1.1_chr2 31483471 31489881 -
2 domain predictions
3 GO terms
LotjaGi2g1v0096200.5
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A1J7FTK8|A0A1J7FTK8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 LjG1.1_chr2 31483471 31489882 -
2 domain predictions
3 GO terms
LotjaGi2g1v0156900.1
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|I1KUF0|I1KUF0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0156900 LjG1.1_chr2 55610611 55618067 +
2 domain predictions
3 GO terms
LotjaGi5g1v0283100.1
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK1; TrEMBL-Plants: tr|A0A0L9TZ45|A0A0L9TZ45_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283100 LjG1.1_chr5 59958410 59964213 -
2 domain predictions
3 GO terms
LotjaGi5g1v0283100.2
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A0S3SNE1|A0A0S3SNE1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283100 LjG1.1_chr5 59958684 59963140 -
2 domain predictions
3 GO terms
LotjaGi5g1v0283100.3
n.a. Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A0S3SNE1|A0A0S3SNE1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283100 LjG1.1_chr5 59958904 59963121 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.1
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66659626 66666182 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.2
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66664741 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.3
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66664755 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.4
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665860 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.5
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665860 -
2 domain predictions
3 GO terms
LotjaGi6g1v0354800.6
n.a. Receptor-like kinase; TAIR: AT4G33430.1 BRI1-associated receptor kinase; Swiss-Prot: sp|Q94F62|BAK1_ARATH BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; TrEMBL-Plants: tr|A0A151UHV4|A0A151UHV4_CAJCA BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Found in the gene: LotjaGi6g1v0354800 LjG1.1_chr6 66660113 66665861 -
2 domain predictions
3 GO terms