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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2167330 |
| Transcript ID | Lj5g3v2167330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 5-like [Glycine max] gi|356536234|ref|XP_003536644.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 285 | 280 | 3.20E-231 | – | |
| PANTHER | 6 | 285 | 280 | 3.20E-231 | – | |
| SUPERFAMILY | 73 | 126 | 54 | 6.83E-18 | ||
| Gene3D | 86 | 174 | 89 | 2.00E-12 | ||
| ProSiteProfiles | 86 | 136 | 51 | 10.17 | ||
| SMART | 103 | 136 | 34 | 0.28 | ||
| Coils | 150 | 170 | 21 | – | – | |
| SUPERFAMILY | 158 | 247 | 90 | 6.83E-18 | ||
| Gene3D | 175 | 268 | 94 | 5.10E-07 | ||
| ProSiteProfiles | 223 | 256 | 34 | 7.778 | ||
| SMART | 223 | 256 | 34 | 61 | ||
| Pfam | 302 | 411 | 110 | 1.10E-30 | ||
| PANTHER | 316 | 416 | 101 | 3.20E-231 | – | |
| PANTHER | 316 | 416 | 101 | 3.20E-231 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2167330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2167330.1, powered by CORGI.
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