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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2169550 |
| Transcript ID | Lj5g3v2169550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: notchless protein homolog [Glycine max] gi|356559633|ref|XP_003548103.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 410 | 397 | 2.70E-281 | – | |
| PANTHER | 14 | 410 | 397 | 2.70E-281 | – | |
| Pfam | 23 | 79 | 57 | 1.30E-12 | ||
| SMART | 105 | 144 | 40 | 1.80E-11 | ||
| Pfam | 107 | 144 | 38 | 1.00E-08 | ||
| Gene3D | 107 | 300 | 194 | 9.70E-80 | ||
| CDD | 108 | 409 | 302 | 2.09E-71 | – | |
| SUPERFAMILY | 108 | 409 | 302 | 2.38E-71 | ||
| ProSiteProfiles | 112 | 410 | 299 | 53.626 | ||
| ProSiteProfiles | 112 | 153 | 42 | 18.529 | ||
| ProSitePatterns | 131 | 145 | 15 | – | ||
| PRINTS | 131 | 145 | 15 | 1.20E-06 | ||
| SMART | 147 | 186 | 40 | 2.80E-11 | ||
| Pfam | 149 | 186 | 38 | 4.60E-07 | ||
| ProSiteProfiles | 154 | 195 | 42 | 12.981 | ||
| SMART | 190 | 234 | 45 | 0.0055 | ||
| Pfam | 196 | 234 | 39 | 4.20E-04 | ||
| ProSiteProfiles | 197 | 235 | 39 | 10.609 | ||
| SMART | 237 | 275 | 39 | 7.90E-09 | ||
| Pfam | 239 | 274 | 36 | 5.30E-06 | ||
| ProSiteProfiles | 244 | 284 | 41 | 12.747 | ||
| PRINTS | 262 | 276 | 15 | 1.20E-06 | ||
| ProSitePatterns | 262 | 276 | 15 | – | ||
| SMART | 278 | 353 | 76 | 0.0037 | ||
| Pfam | 279 | 352 | 74 | 0.062 | ||
| Gene3D | 337 | 409 | 73 | 9.70E-80 | ||
| SMART | 357 | 396 | 40 | 5.00E-09 | ||
| Pfam | 364 | 396 | 33 | 1.40E-08 | ||
| ProSiteProfiles | 364 | 405 | 42 | 15.254 | ||
| ProSitePatterns | 383 | 397 | 15 | – | ||
| PRINTS | 383 | 397 | 15 | 1.20E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2169550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2169550.1, powered by CORGI.
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