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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2220250 |
| Transcript ID | Lj5g3v2220250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitrate and chloride transporter [Medicago truncatula] gi|358346702|ref|XP_003637404.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 8 | 567 | 560 | 0 | – | |
| PANTHER | 8 | 567 | 560 | 0 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 25 | 47 | 23 | – | – | |
| SUPERFAMILY | 30 | 241 | 212 | 1.83E-05 | ||
| Pfam | 46 | 248 | 203 | 1.80E-71 | ||
| Phobius | 48 | 66 | 19 | – | – | |
| Gene3D | 55 | 193 | 139 | 2.20E-04 | – | |
| TMHMM | 67 | 89 | 23 | – | – | |
| Phobius | 67 | 87 | 21 | – | – | |
| Phobius | 88 | 132 | 45 | – | – | |
| TMHMM | 132 | 154 | 23 | – | – | |
| Phobius | 133 | 158 | 26 | – | – | |
| Phobius | 159 | 163 | 5 | – | – | |
| Phobius | 164 | 183 | 20 | – | – | |
| TMHMM | 164 | 185 | 22 | – | – | |
| Phobius | 184 | 194 | 11 | – | – | |
| Phobius | 195 | 218 | 24 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| SUPERFAMILY | 205 | 258 | 54 | 3.92E-18 | ||
| Phobius | 219 | 229 | 11 | – | – | |
| TMHMM | 229 | 248 | 20 | – | – | |
| Phobius | 230 | 249 | 20 | – | – | |
| Phobius | 250 | 331 | 82 | – | – | |
| MobiDBLite | 281 | 302 | 22 | – | – | |
| SUPERFAMILY | 319 | 547 | 229 | 3.92E-18 | ||
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 332 | 356 | 25 | – | – | |
| Gene3D | 338 | 546 | 209 | 3.00E-15 | – | |
| Phobius | 357 | 375 | 19 | – | – | |
| Phobius | 376 | 395 | 20 | – | – | |
| Phobius | 396 | 406 | 11 | – | – | |
| Phobius | 407 | 426 | 20 | – | – | |
| TMHMM | 408 | 425 | 18 | – | – | |
| Phobius | 427 | 431 | 5 | – | – | |
| TMHMM | 432 | 454 | 23 | – | – | |
| Phobius | 432 | 454 | 23 | – | – | |
| Phobius | 455 | 465 | 11 | – | – | |
| Phobius | 466 | 485 | 20 | – | – | |
| Phobius | 486 | 520 | 35 | – | – | |
| TMHMM | 521 | 543 | 23 | – | – | |
| Phobius | 521 | 542 | 22 | – | – | |
| Phobius | 543 | 578 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2220250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2220250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.