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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2220260 |
| Transcript ID | Lj5g3v2220260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitrate and chloride transporter [Medicago truncatula] gi|358346702|ref|XP_003637404.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 10 | 613 | 604 | 0 | – | |
| PANTHER | 10 | 613 | 604 | 0 | – | |
| Pfam | 26 | 270 | 245 | 4.30E-92 | ||
| SUPERFAMILY | 27 | 269 | 243 | 5.23E-11 | ||
| Phobius | 27 | 49 | 23 | – | – | |
| CDD | 27 | 265 | 239 | 3.24E-04 | ||
| TMHMM | 27 | 49 | 23 | – | – | |
| Gene3D | 30 | 216 | 187 | 5.70E-06 | – | |
| Phobius | 50 | 90 | 41 | – | – | |
| TMHMM | 91 | 113 | 23 | – | – | |
| Phobius | 91 | 112 | 22 | – | – | |
| Phobius | 113 | 162 | 50 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 163 | 181 | 19 | – | – | |
| Phobius | 182 | 186 | 5 | – | – | |
| TMHMM | 186 | 208 | 23 | – | – | |
| Phobius | 187 | 209 | 23 | – | – | |
| Phobius | 210 | 220 | 11 | – | – | |
| TMHMM | 220 | 242 | 23 | – | – | |
| Phobius | 221 | 241 | 21 | – | – | |
| Phobius | 242 | 252 | 11 | – | – | |
| TMHMM | 252 | 272 | 21 | – | – | |
| Phobius | 253 | 272 | 20 | – | – | |
| Phobius | 273 | 364 | 92 | – | – | |
| MobiDBLite | 303 | 336 | 34 | – | – | |
| SUPERFAMILY | 356 | 583 | 228 | 1.15E-17 | ||
| Phobius | 365 | 389 | 25 | – | – | |
| TMHMM | 366 | 388 | 23 | – | – | |
| Gene3D | 371 | 578 | 208 | 1.70E-15 | – | |
| Phobius | 390 | 408 | 19 | – | – | |
| TMHMM | 408 | 427 | 20 | – | – | |
| Phobius | 409 | 428 | 20 | – | – | |
| Phobius | 429 | 439 | 11 | – | – | |
| Phobius | 440 | 459 | 20 | – | – | |
| TMHMM | 440 | 459 | 20 | – | – | |
| Phobius | 460 | 464 | 5 | – | – | |
| TMHMM | 464 | 486 | 23 | – | – | |
| Phobius | 465 | 487 | 23 | – | – | |
| Phobius | 488 | 498 | 11 | – | – | |
| TMHMM | 499 | 516 | 18 | – | – | |
| Phobius | 499 | 518 | 20 | – | – | |
| Phobius | 519 | 553 | 35 | – | – | |
| Phobius | 554 | 575 | 22 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 576 | 625 | 50 | – | – | |
| MobiDBLite | 605 | 625 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2220260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2220260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.