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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2220280 |
| Transcript ID | Lj5g3v2220280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitrate and chloride transporter [Medicago truncatula] gi|358346702|ref|XP_003637404.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 575 | 575 | 0 | – | |
| Pfam | 1 | 235 | 235 | 2.90E-87 | ||
| Phobius | 1 | 54 | 54 | – | – | |
| PANTHER | 1 | 575 | 575 | 0 | – | |
| SUPERFAMILY | 3 | 177 | 175 | 3.53E-22 | ||
| Gene3D | 5 | 177 | 173 | 6.40E-05 | – | |
| TMHMM | 55 | 77 | 23 | – | – | |
| Phobius | 55 | 76 | 22 | – | – | |
| Phobius | 77 | 119 | 43 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 120 | 145 | 26 | – | – | |
| Phobius | 146 | 150 | 5 | – | – | |
| TMHMM | 151 | 170 | 20 | – | – | |
| Phobius | 151 | 170 | 20 | – | – | |
| Phobius | 171 | 181 | 11 | – | – | |
| Phobius | 182 | 204 | 23 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 205 | 215 | 11 | – | – | |
| Phobius | 216 | 236 | 21 | – | – | |
| TMHMM | 220 | 239 | 20 | – | – | |
| Phobius | 237 | 323 | 87 | – | – | |
| SUPERFAMILY | 311 | 538 | 228 | 3.53E-22 | ||
| Phobius | 324 | 348 | 25 | – | – | |
| TMHMM | 325 | 347 | 23 | – | – | |
| Gene3D | 330 | 537 | 208 | 1.20E-11 | – | |
| Phobius | 349 | 359 | 11 | – | – | |
| Phobius | 360 | 378 | 19 | – | – | |
| Phobius | 379 | 398 | 20 | – | – | |
| Phobius | 399 | 418 | 20 | – | – | |
| TMHMM | 400 | 417 | 18 | – | – | |
| Phobius | 419 | 423 | 5 | – | – | |
| TMHMM | 424 | 446 | 23 | – | – | |
| Phobius | 424 | 446 | 23 | – | – | |
| Phobius | 447 | 457 | 11 | – | – | |
| TMHMM | 456 | 478 | 23 | – | – | |
| Phobius | 458 | 477 | 20 | – | – | |
| Phobius | 478 | 512 | 35 | – | – | |
| TMHMM | 513 | 535 | 23 | – | – | |
| Phobius | 513 | 537 | 25 | – | – | |
| Phobius | 538 | 575 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2220280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2220280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.