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Lj5g3v2256170.2

Overview

Field Value
Gene ID Lj5g3v2256170
Transcript ID Lj5g3v2256170.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: coatomer subunit delta-like isoform X1 [Cicer arietinum] gi|502120970|ref|XP_004497143.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 27 27
PANTHER 1 173 173 3.60E-99
PANTHER 1 173 173 3.60E-99
ProSiteProfiles 1 174 174 22.134
CDD 2 174 173 5.02E-77
SUPERFAMILY 3 160 158 1.57E-15
Pfam 4 162 159 4.00E-21
Gene3D 59 145 87 4.60E-04

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Retrograde vesicle-mediated transport, Golgi to ER The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
Cellular component COPI vesicle coat One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj5g3v2256170.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2256170.2, powered by CORGI.

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