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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027059
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.860s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v2237630.1
n.a. Coatomer subunit delta-3 [Medicago truncatula] gi|357454817|ref|XP_003597689.1| chr5 32103103 32108569 -
2 domain predictions
2 GO terms
Lj5g3v2237630.2
n.a. Coatomer subunit delta-3 [Medicago truncatula] gi|357454817|ref|XP_003597689.1| chr5 32103949 32108234 -
2 domain predictions
2 GO terms
Lj5g3v2256170.1
n.a. PREDICTED: coatomer subunit delta-like [Glycine max] gi|356545133|ref|XP_003540999.1| chr5 32623576 32628811 +
2 domain predictions
2 GO terms
Lj5g3v2256170.2
n.a. PREDICTED: coatomer subunit delta-like isoform X1 [Cicer arietinum] gi|502120970|ref|XP_004497143.1| chr5 32627654 32628811 +
2 domain predictions
2 GO terms
LotjaGi5g1v0343900.1
n.a. Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|G7II11|G7II11_MEDTR Coatomer subunit delta-like protein; Found in the gene: LotjaGi5g1v0343900 LjG1.1_chr5 66092734 66098168 -
2 domain predictions
2 GO terms
LotjaGi5g1v0343900.2
n.a. Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|G7II11|G7II11_MEDTR Coatomer subunit delta-like protein; Found in the gene: LotjaGi5g1v0343900 LjG1.1_chr5 66093233 66096871 -
2 domain predictions
2 GO terms
LotjaGi5g1v0350800.1
n.a. Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 LjG1.1_chr5 66661466 66666939 +
2 domain predictions
2 GO terms
LotjaGi5g1v0350800.2
n.a. Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 LjG1.1_chr5 66662676 66666668 +
2 domain predictions
2 GO terms
LotjaGi5g1v0350800.3
n.a. Coatomer subunit delta-like protein; TAIR: AT5G05010.1 clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|Q93Y22|COPD_ARATH Coatomer subunit delta; TrEMBL-Plants: tr|A0A1J7FSC8|A0A1J7FSC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0350800 LjG1.1_chr5 66662936 66666668 +
2 domain predictions
2 GO terms