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Lj5g3v2298220.1

Overview

Field Value
Gene ID Lj5g3v2298220
Transcript ID Lj5g3v2298220.1
Lotus japonicus genome version MG20 v3.0
Description serine/threonine protein kinase [Glycine max] gi|223452408|gb|ACM89531.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
1 15 15 1.80E-260 –
PANTHER
PTHR27001:SF115
1 15 15 1.80E-260 –
MobiDBLite
mobidb-lite
14 53 40 – –
PIRSF
PIRSF000654
28 358 331 2.30E-32 –
PANTHER
PTHR27001:SF115
38 356 319 1.80E-260 –
PANTHER
PTHR27001
38 356 319 1.80E-260 –
Gene3D
G3DSA:3.30.200.20
43 147 105 4.50E-22 –
SUPERFAMILY
SSF56112
51 349 299 3.42E-73
IPR011009
ProSiteProfiles
PS50011
71 353 283 36.174
IPR000719
SMART
SM00219
71 349 279 9.00E-28
IPR020635
Pfam
PF07714
76 349 274 2.10E-46
IPR001245
ProSitePatterns
PS00107
77 100 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
151 348 198 1.20E-42 –
ProSitePatterns
PS00109
199 211 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj5g3v2298220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2298220.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.