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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2302910 |
| Transcript ID | Lj5g3v2302910.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: signal peptide peptidase-like 5-like isoform X1 [Cicer arietinum] gi|502121709|ref|XP_004497418.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 173 | 173 | 1.10E-130 | ||
| Pfam | 1 | 165 | 165 | 6.10E-56 | ||
| SMART | 1 | 154 | 154 | 1.00E-14 | ||
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 173 | 173 | 1.10E-130 | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 34 | 69 | 36 | – | – | |
| Phobius | 70 | 90 | 21 | – | – | |
| Phobius | 91 | 101 | 11 | – | – | |
| Phobius | 102 | 123 | 22 | – | – | |
| TMHMM | 102 | 124 | 23 | – | – | |
| Phobius | 124 | 134 | 11 | – | – | |
| TMHMM | 134 | 153 | 20 | – | – | |
| Phobius | 135 | 153 | 19 | – | – | |
| Phobius | 154 | 173 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v2302910.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2302910.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.