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Lj6g3v0025650.1

Overview

Field Value
Gene ID Lj6g3v0025650
Transcript ID Lj6g3v0025650.1
Lotus japonicus genome version MG20 v3.0
Description Disease resistance protein I-2 [Medicago truncatula] gi|358346964|ref|XP_003637533.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155
1 791 791 0 –
PANTHER
PTHR23155:SF580
1 791 791 0 –
CDD
cd14798
47 88 42 2.26E-07 –
Coils
Coil
111 131 21 – –
SUPERFAMILY
SSF52540
148 420 273 1.26E-72
IPR027417
Gene3D
G3DSA:3.40.50.300
168 336 169 3.90E-13
IPR027417
Pfam
PF00931
180 447 268 1.30E-69
IPR002182
PRINTS
PR00364
186 201 16 4.70E-19 –
PRINTS
PR00364
259 273 15 4.70E-19 –
PRINTS
PR00364
357 371 15 4.70E-19 –
SUPERFAMILY
SSF52058
482 683 202 1.63E-36
IPR032675
Gene3D
G3DSA:3.80.10.10
536 664 129 1.70E-18
IPR032675
SUPERFAMILY
SSF52058
713 888 176 1.63E-36
IPR032675
Gene3D
G3DSA:3.80.10.10
739 1037 299 4.40E-19
IPR032675
SUPERFAMILY
SSF52047
844 1040 197 1.69E-19 –
PRINTS
PR00364
873 889 17 4.70E-19 –
PANTHER
PTHR23155:SF580
974 997 24 0 –
PANTHER
PTHR23155
974 997 24 0 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj6g3v0025650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0025650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.