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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0026670 |
| Transcript ID | Lj6g3v0026670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR3-A-like [Glycine max] gi|356533306|ref|XP_003535206.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 8.30E-251 | ||
| Pfam | 1 | 359 | 359 | 6.80E-85 | ||
| PANTHER | 1 | 360 | 360 | 8.30E-251 | – | |
| Phobius | 1 | 77 | 77 | – | – | |
| SUPERFAMILY | 34 | 135 | 102 | 5.89E-09 | ||
| TMHMM | 34 | 56 | 23 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 78 | 99 | 22 | – | – | |
| Phobius | 100 | 110 | 11 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 111 | 130 | 20 | – | – | |
| Phobius | 131 | 219 | 89 | – | – | |
| SUPERFAMILY | 211 | 283 | 73 | 5.89E-09 | ||
| Phobius | 220 | 240 | 21 | – | – | |
| TMHMM | 223 | 245 | 23 | – | – | |
| Phobius | 241 | 259 | 19 | – | – | |
| TMHMM | 260 | 279 | 20 | – | – | |
| Phobius | 260 | 280 | 21 | – | – | |
| Phobius | 281 | 299 | 19 | – | – | |
| TMHMM | 299 | 321 | 23 | – | – | |
| Phobius | 300 | 321 | 22 | – | – | |
| Phobius | 322 | 340 | 19 | – | – | |
| Phobius | 341 | 358 | 18 | – | – | |
| TMHMM | 341 | 358 | 18 | – | – | |
| Phobius | 359 | 360 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v0026670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0026670.1, powered by CORGI.
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