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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0227400 |
| Transcript ID | Lj6g3v0227400.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: HEAT repeat-containing protein 6-like [Cicer arietinum] gi|502134262|ref|XP_004502055.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 778 | 778 | – | – | |
| PANTHER | 1 | 113 | 113 | 0 | – | |
| PANTHER | 145 | 666 | 522 | 0 | – | |
| MobiDBLite | 327 | 353 | 27 | – | – | |
| SUPERFAMILY | 401 | 476 | 76 | 6.14E-24 | ||
| Pfam | 403 | 582 | 180 | 5.80E-47 | ||
| SUPERFAMILY | 543 | 656 | 114 | 6.14E-24 | ||
| Gene3D | 547 | 705 | 159 | 1.60E-08 | ||
| PANTHER | 687 | 705 | 19 | 0 | – | |
| PANTHER | 737 | 935 | 199 | 0 | – | |
| Gene3D | 753 | 922 | 170 | 1.60E-08 | ||
| SUPERFAMILY | 768 | 934 | 167 | 6.14E-24 | ||
| Phobius | 779 | 800 | 22 | – | – | |
| Phobius | 801 | 1162 | 362 | – | – | |
| Gene3D | 923 | 934 | 12 | 1.90E-07 | ||
| PANTHER | 968 | 1162 | 195 | 0 | – | |
| Gene3D | 974 | 1050 | 77 | 1.90E-07 | ||
| SUPERFAMILY | 974 | 1073 | 100 | 6.14E-24 | ||
| CDD | 983 | 1051 | 69 | 0.00510531 | – | |
| Coils | 1162 | 1162 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v0227400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0227400.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.