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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0365860 |
| Transcript ID | Lj6g3v0365860.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger CCCH domain-containing protein 44-like [Fragaria vesca subsp]. vesca] gi|470138342|ref|XP_004304916.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 321 | 311 | 7.30E-47 | – | |
| PANTHER | 11 | 321 | 311 | 7.30E-47 | – | |
| SUPERFAMILY | 14 | 71 | 58 | 1.76E-05 | ||
| CDD | 17 | 62 | 46 | 4.46E-14 | – | |
| SMART | 204 | 310 | 107 | 1.00E-31 | ||
| ProSiteProfiles | 204 | 333 | 130 | 30.937 | ||
| SUPERFAMILY | 205 | 330 | 126 | 6.67E-26 | ||
| Pfam | 209 | 308 | 100 | 1.10E-18 | ||
| PANTHER | 344 | 389 | 46 | 7.30E-47 | – | |
| PANTHER | 344 | 389 | 46 | 7.30E-47 | – | |
| Coils | 353 | 380 | 28 | – | – | |
| Coils | 433 | 453 | 21 | – | – | |
| Coils | 479 | 513 | 35 | – | – | |
| Coils | 525 | 562 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of Lj6g3v0365860.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0365860.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.