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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0409420 |
| Transcript ID | Lj6g3v0409420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nicastrin-like [Glycine max] gi|356539812|ref|XP_003538387.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 434 | 434 | 8.40E-146 | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 434 | 434 | 8.40E-146 | ||
| Phobius | 4 | 14 | 11 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 434 | 415 | – | – | |
| SUPERFAMILY | 219 | 352 | 134 | 1.61E-16 | – | |
| Gene3D | 237 | 433 | 197 | 5.10E-11 | – | |
| Pfam | 246 | 433 | 188 | 1.20E-63 | ||
| SUPERFAMILY | 391 | 433 | 43 | 1.61E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Protein processing | Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein. |
Expression pattern of Lj6g3v0409420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0409420.1, powered by CORGI.
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