Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj6g3v0521600.1

Overview

Field Value
Gene ID Lj6g3v0521600
Transcript ID Lj6g3v0521600.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description phospholipase C [Pisum sativum] gi|21955869|emb|CAA75546.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00149
4 87 84 2.20E-33
IPR001711
SUPERFAMILY
SSF51695
18 98 81 4.97E-36
IPR017946
Gene3D
G3DSA:3.20.20.190
19 95 77 8.80E-30
IPR017946
PANTHER
PTHR10336
19 235 217 3.20E-182
IPR001192
ProSiteProfiles
PS50008
19 86 68 34.558
IPR001711
Pfam
PF00387
19 86 68 1.90E-26
IPR001711
PANTHER
PTHR10336:SF92
19 235 217 3.20E-182 –
PRINTS
PR00390
25 46 22 4.50E-17
IPR001192
PRINTS
PR00390
46 64 19 4.50E-17
IPR001192
ProSiteProfiles
PS50004
93 200 108 12.943
IPR000008
CDD
cd00275
105 234 130 4.27E-37 –
Gene3D
G3DSA:2.60.40.150
106 234 129 4.20E-21
IPR000008
Pfam
PF00168
107 208 102 1.50E-10
IPR000008
SMART
SM00239
107 215 109 5.00E-12
IPR000008
SUPERFAMILY
SSF49562
107 234 128 9.41E-27
IPR000008
PRINTS
PR00390
201 211 11 4.50E-17
IPR001192

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004435
Molecular function Phosphatidylinositol phospholipase C activity Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
Subterm of
GO:0006629
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Subterm of
GO:0007165
Biological process Signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
Subterm of
Part of
GO:0008081
Molecular function Phosphoric diester hydrolase activity Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.
Subterm of
GO:0035556
Biological process Intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj6g3v0521600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0521600.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.