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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0525130 |
| Transcript ID | Lj6g3v0525130.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula] gi|357463453|ref|XP_003602008.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 324 | 324 | 5.76E-20 | ||
| Gene3D | 1 | 282 | 282 | 5.00E-60 | ||
| PANTHER | 2 | 14 | 13 | 0 | – | |
| PANTHER | 2 | 14 | 13 | 0 | – | |
| CDD | 45 | 149 | 105 | 3.92E-04 | – | |
| SMART | 72 | 110 | 39 | 77 | ||
| SMART | 156 | 198 | 43 | 190 | ||
| SUPERFAMILY | 366 | 500 | 135 | 4.22E-09 | ||
| Gene3D | 367 | 651 | 285 | 5.00E-60 | ||
| PANTHER | 513 | 594 | 82 | 0 | – | |
| PANTHER | 513 | 594 | 82 | 0 | – | |
| SMART | 525 | 568 | 44 | 150 | ||
| SUPERFAMILY | 527 | 909 | 383 | 2.12E-36 | ||
| CDD | 537 | 652 | 116 | 0.0053996 | – | |
| ProSiteProfiles | 537 | 581 | 45 | 9.537 | ||
| SMART | 570 | 611 | 42 | 1.5 | ||
| PANTHER | 637 | 1296 | 660 | 0 | – | |
| PANTHER | 637 | 1296 | 660 | 0 | – | |
| SMART | 652 | 693 | 42 | 260 | ||
| Gene3D | 657 | 1031 | 375 | 2.60E-36 | ||
| CDD | 665 | 778 | 114 | 5.58E-04 | – | |
| SMART | 738 | 779 | 42 | 370 | ||
| CDD | 749 | 861 | 113 | 1.66E-04 | – | |
| SMART | 780 | 820 | 41 | 59 | ||
| SMART | 822 | 862 | 41 | 150 | ||
| SMART | 906 | 948 | 43 | 290 | ||
| SUPERFAMILY | 921 | 1287 | 367 | 7.45E-31 | ||
| CDD | 1043 | 1127 | 85 | 0.00297454 | – | |
| Gene3D | 1044 | 1243 | 200 | 1.50E-22 | ||
| SMART | 1071 | 1110 | 40 | 15 | ||
| CDD | 1167 | 1244 | 78 | 4.33E-04 | – | |
| SMART | 1198 | 1238 | 41 | 2.2 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0525130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0525130.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.