Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR23315
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 128 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.026s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0044959.1
n.a. PREDICTED: U-box domain-containing protein 40-like [Glycine max] gi|356550235|ref|XP_003543493.1| chr0 14787045 14787524 +
1 domain prediction
 –
Lj0g3v0068969.1
n.a. PREDICTED: vacuolar protein 8-like isoform X1 [Cicer arietinum] gi|502146973|ref|XP_004506680.1| chr0 24770747 24771322 -
1 domain prediction
 –
Lj0g3v0072459.1
n.a. Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula] gi|357463453|ref|XP_003602008.1| chr0 26881203 26882884 -
1 domain prediction
 –
Lj0g3v0076489.1
n.a. PREDICTED: U-box domain-containing protein 13-like [Cicer arietinum] gi|502174874|ref|XP_004515619.1| chr0 29166796 29174490 +
1 domain prediction
 –
Lj0g3v0076649.1
n.a. PREDICTED: vacuolar protein 8-like [Glycine max] gi|356532060|ref|XP_003534592.1| chr0 29291299 29293291 +
1 domain prediction
 –
Lj0g3v0078379.1
n.a. PREDICTED: U-box domain-containing protein 14-like [Glycine max] gi|356524336|ref|XP_003530785.1| chr0 30164640 30165155 +
1 domain prediction
 –
Lj0g3v0162479.1
n.a. PREDICTED: U-box domain-containing protein 7-like [Glycine max] gi|356555412|ref|XP_003546026.1| chr0 76621602 76624789 -
1 domain prediction
 –
Lj0g3v0179269.1
n.a. PREDICTED: LOW QUALITY PROTEIN: armadillo repeat-containing kinesin-like protein 2-like [Cicer arietinum] gi|502104771|ref|XP_004492644.1| chr0 87012005 87013995 +
1 domain prediction
 –
Lj0g3v0188449.2
n.a. PREDICTED: U-box domain-containing protein 4-like [Cicer arietinum] gi|502129552|ref|XP_004500342.1| chr0 92100909 92112078 -
1 domain prediction
 –
Lj0g3v0230519.1
n.a. Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula] gi|357463453|ref|XP_003602008.1| chr0 119415477 119418526 +
1 domain prediction
 –
Lj0g3v0235399.1
n.a. Armadillo/beta-catenin-like repeat, C2 calcium/lipid-binding domain (CaLB) protein isoform 1 [Theobroma cacao] gi|508724457|gb|EOY16354.1| chr0 121975395 121986177 +
1 domain prediction
 –
Lj0g3v0243869.1
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| chr0 126564978 126566851 -
1 domain prediction
 –
Lj0g3v0248689.1
n.a. PREDICTED: protein ARABIDILLO 1-like [Cicer arietinum] gi|502090026|ref|XP_004489097.1| chr0 128895576 128896850 -
1 domain prediction
 –
Lj0g3v0248789.1
n.a. PREDICTED: protein ARABIDILLO 1-like [Glycine max] gi|356568604|ref|XP_003552500.1| chr0 128931432 128934505 +
1 domain prediction
 –
Lj0g3v0252669.1
n.a. PREDICTED: U-box domain-containing protein 14-like [Glycine max] gi|356524336|ref|XP_003530785.1| chr0 131072397 131073677 -
1 domain prediction
 –
Lj0g3v0261839.1
n.a. U-box domain-containing protein [Medicago truncatula] gi|357456825|ref|XP_003598693.1| chr0 135686544 135690720 -
1 domain prediction
 –
Lj0g3v0274039.1
n.a. U-box domain-containing protein [Medicago truncatula] gi|357438777|ref|XP_003589665.1| chr0 142049615 142057959 -
1 domain prediction
 –
Lj0g3v0274039.2
n.a. U-box domain-containing protein [Medicago truncatula] gi|357438777|ref|XP_003589665.1| chr0 142049615 142055794 -
1 domain prediction
 –
Lj0g3v0274989.1
n.a. Importin subunit alpha-2 [Medicago truncatula] gi|357475937|ref|XP_003608254.1| chr0 142631409 142633639 -
1 domain prediction
 –
Lj0g3v0286609.1
n.a. PREDICTED: vacuolar protein 8-like [Glycine max] gi|356522654|ref|XP_003529961.1| chr0 148895010 148897537 -
1 domain prediction
 –
Lj0g3v0319829.1
n.a. PREDICTED: U-box domain-containing protein 14-like [Glycine max] gi|356524336|ref|XP_003530785.1| chr0 166940659 166941852 -
1 domain prediction
 –
Lj0g3v0328059.1
n.a. PREDICTED: U-box domain-containing protein 14-like [Glycine max] gi|356524336|ref|XP_003530785.1| chr0 171480275 171480709 +
1 domain prediction
 –
Lj0g3v0331289.1
n.a. PREDICTED: U-box domain-containing protein 8-like [Cicer arietinum] gi|502142430|ref|XP_004504954.1| chr0 173140640 173142964 +
1 domain prediction
 –
Lj0g3v0343689.1
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| chr0 180194569 180204934 -
1 domain prediction
 –
Lj0g3v0343689.2
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| chr0 180197934 180204934 -
1 domain prediction
 –
Lj0g3v0343689.3
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| chr0 180200209 180204251 -
1 domain prediction
 –
Lj0g3v0354239.1
n.a. PREDICTED: U-box domain-containing protein 4-like [Glycine max] gi|356569539|ref|XP_003552957.1| chr0 186547902 186551887 -
1 domain prediction
 –
Lj0g3v0363829.1
n.a. ARM repeat superfamily protein [Theobroma cacao] gi|508725730|gb|EOY17627.1| chr0 191979751 191983250 +
1 domain prediction
 –
Lj1g3v0053660.1
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502159272|ref|XP_004511450.1| chr1 619184 628227 -
1 domain prediction
 –
Lj1g3v0053660.3
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502159272|ref|XP_004511450.1| chr1 619184 628268 -
1 domain prediction
 –
Lj1g3v0415480.1
n.a. PREDICTED: U-box domain-containing protein 38-like [Cicer arietinum] gi|502133980|ref|XP_004501958.1| chr1 5320888 5323441 -
1 domain prediction
 –
Lj1g3v0449060.1
n.a. n.a. chr1 6015729 6018980 -
1 domain prediction
 –
Lj1g3v0982010.1
n.a. PREDICTED: U-box domain-containing protein 8-like [Vitis vinifera] gi|359496637|ref|XP_003635287.1| chr1 12353515 12353877 +
1 domain prediction
 –
Lj1g3v1819880.1
n.a. U-box domain-containing protein [Medicago truncatula] gi|357466041|ref|XP_003603305.1| chr1 22190438 22192042 -
1 domain prediction
 –
Lj1g3v2739210.1
n.a. PREDICTED: U-box domain-containing protein 15-like [Glycine max] gi|356530052|ref|XP_003533598.1| chr1 31474305 31478297 +
1 domain prediction
 –
Lj1g3v2741270.1
n.a. PREDICTED: U-box domain-containing protein 15-like [Glycine max] gi|356530052|ref|XP_003533598.1| chr1 31514990 31518305 +
1 domain prediction
 –
Lj1g3v2741270.2
n.a. PREDICTED: U-box domain-containing protein 15-like [Cicer arietinum] gi|502105316|ref|XP_004492777.1| chr1 31514990 31516955 +
1 domain prediction
 –
Lj1g3v2939610.1
n.a. PREDICTED: protein ARABIDILLO 1-like [Cicer arietinum] gi|502090026|ref|XP_004489097.1| chr1 33215250 33227683 -
1 domain prediction
 –
Lj1g3v3459850.1
n.a. PREDICTED: U-box domain-containing protein 13-like [Cicer arietinum] gi|502174874|ref|XP_004515619.1| chr1 40194576 40202272 +
1 domain prediction
 –
Lj1g3v3590740.1
n.a. PREDICTED: U-box domain-containing protein 9-like [Glycine max] gi|356567779|ref|XP_003552093.1| chr1 41224523 41227552 -
1 domain prediction
 –
Lj1g3v4433200.1
n.a. PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum] gi|502109543|ref|XP_004493669.1| chr1 51667606 51672748 -
1 domain prediction
 –
Lj1g3v4515400.1
n.a. PREDICTED: U-box domain-containing protein 3-like [Glycine max] gi|356572260|ref|XP_003554287.1| chr1 52872716 52877549 +
1 domain prediction
 –
Lj1g3v5020920.1
n.a. PREDICTED: U-box domain-containing protein 9-like [Cicer arietinum] gi|502113800|ref|XP_004494763.1| chr1 61173643 61175993 +
1 domain prediction
 –
Lj2g3v0922610.1
n.a. PREDICTED: U-box domain-containing protein 3-like [Cicer arietinum] gi|502090462|ref|XP_004489236.1| chr2 14723998 14724916 -
1 domain prediction
 –
Lj2g3v0922620.1
n.a. PREDICTED: U-box domain-containing protein 3-like [Cicer arietinum] gi|502090462|ref|XP_004489236.1| chr2 14724074 14725652 -
1 domain prediction
 –
Lj2g3v1020040.1
n.a. PREDICTED: U-box domain-containing protein 40-like [Glycine max] gi|356550235|ref|XP_003543493.1| chr2 15918016 15920723 -
1 domain prediction
 –
Lj2g3v1391600.1
n.a. PREDICTED: U-box domain-containing protein 19-like [Cicer arietinum] gi|502093005|ref|XP_004489855.1| chr2 22066031 22068403 +
1 domain prediction
 –
Lj2g3v1415490.1
n.a. Armadillo repeat only 4 [Theobroma cacao] gi|508708711|gb|EOY00608.1| chr2 22480142 22482817 -
1 domain prediction
 –
Lj2g3v1670870.1
n.a. PREDICTED: U-box domain-containing protein 40-like [Glycine max] gi|356550235|ref|XP_003543493.1| chr2 25984559 25985886 -
1 domain prediction
 –
Lj2g3v1695200.1
n.a. Vacuolar protein [Medicago truncatula] gi|357483789|ref|XP_003612181.1| chr2 26143345 26144685 -
1 domain prediction
 –