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Lj6g3v0528580.1

Overview

Field Value
Gene ID Lj6g3v0528580
Transcript ID Lj6g3v0528580.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: tubulin-folding cofactor C-like [Cicer arietinum] gi|502140152|ref|XP_004504081.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR15139:SF0
13 348 336 1.40E-113 –
PANTHER
PTHR15139
13 348 336 1.40E-113
IPR027684
Pfam
PF16752
21 138 118 6.70E-27
IPR031925
MobiDBLite
mobidb-lite
24 53 30 – –
MobiDBLite
mobidb-lite
145 181 37 – –
ProSiteProfiles
PS51329
160 320 161 34.661
IPR017901
Pfam
PF07986
202 318 117 2.00E-37
IPR012945
Gene3D
G3DSA:2.160.20.70
203 296 94 1.80E-04
IPR016098
SMART
SM00673
208 245 38 1.70E-05
IPR006599
SMART
SM00673
246 280 35 7.70E-04
IPR006599

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000902
Biological process Cell morphogenesis The developmental process in which the size or shape of a cell is generated and organized.
Subterm of
GO:0007023
Biological process Post-chaperonin tubulin folding pathway Completion of folding of alpha- and beta-tubulin; takes place subsequent to chaperonin-mediated partial folding; mediated by a complex of folding cofactors.
Subterm of
GO:0015631
Molecular function Tubulin binding Interacting selectively and non-covalently with monomeric or multimeric forms of tubulin, including microtubules.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj6g3v0528580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0528580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.