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Lj6g3v0776100.1

Overview

Field Value
Gene ID Lj6g3v0776100
Transcript ID Lj6g3v0776100.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine acetyltransferase 3, mitochondrial-like [Cicer arietinum] gi|502146996|ref|XP_004506688.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 32 32 – –
PANTHER
PTHR23416:SF56
56 326 271 4.20E-186 –
PANTHER
PTHR23416
56 326 271 4.20E-186 –
SUPERFAMILY
SSF51161
56 296 241 1.80E-64
IPR011004
Gene3D
G3DSA:1.10.3130.10
59 193 135 3.50E-48 –
Pfam
PF06426
60 164 105 4.70E-34
IPR010493
SMART
SM00971
60 164 105 5.00E-45
IPR010493
TIGRFAM
TIGR01172
132 293 162 2.20E-68
IPR005881
CDD
cd03354
191 291 101 5.51E-53 –
Gene3D
G3DSA:2.160.10.10
194 298 105 1.70E-34 –
Pfam
PF00132
244 278 35 1.90E-10
IPR001451
ProSitePatterns
PS00101
253 281 29 –
IPR018357

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006535
Biological process Cysteine biosynthetic process from serine The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.
Subterm of
GO:0009001
Molecular function Serine O-acetyltransferase activity Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.
Subterm of
GO:0016740
Molecular function Transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj6g3v0776100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0776100.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.