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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0857780 |
| Transcript ID | Lj6g3v0857780.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Bromodomain-containing protein [Medicago truncatula] gi|357459703|ref|XP_003600132.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | – | – | |
| PANTHER | 1 | 562 | 562 | 1.60E-171 | – | |
| PANTHER | 1 | 562 | 562 | 1.60E-171 | – | |
| MobiDBLite | 74 | 124 | 51 | – | – | |
| SUPERFAMILY | 142 | 250 | 109 | 1.57E-34 | ||
| Gene3D | 143 | 260 | 118 | 9.40E-36 | ||
| SMART | 144 | 252 | 109 | 2.20E-32 | ||
| CDD | 151 | 247 | 97 | 1.17E-31 | – | |
| Pfam | 157 | 237 | 81 | 1.90E-25 | ||
| ProSiteProfiles | 163 | 233 | 71 | 19.992 | ||
| PRINTS | 166 | 179 | 14 | 6.00E-15 | ||
| ProSitePatterns | 169 | 225 | 57 | – | ||
| PRINTS | 180 | 196 | 17 | 6.00E-15 | ||
| PRINTS | 196 | 214 | 19 | 6.00E-15 | ||
| PRINTS | 214 | 233 | 20 | 6.00E-15 | ||
| MobiDBLite | 624 | 712 | 89 | – | – | |
| MobiDBLite | 800 | 860 | 61 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0857780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0857780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.