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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0920070 |
| Transcript ID | Lj6g3v0920070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable folate-biopterin transporter 4-like [Cicer arietinum] gi|502128688|ref|XP_004500047.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 7 | 26 | 20 | – | – | |
| PANTHER | 25 | 259 | 235 | 2.70E-137 | – | |
| PANTHER | 25 | 259 | 235 | 2.70E-137 | – | |
| SUPERFAMILY | 27 | 256 | 230 | 1.66E-09 | ||
| Phobius | 27 | 37 | 11 | – | – | |
| Phobius | 38 | 59 | 22 | – | – | |
| Phobius | 60 | 70 | 11 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 71 | 89 | 19 | – | – | |
| Phobius | 90 | 100 | 11 | – | – | |
| Pfam | 95 | 259 | 165 | 7.30E-37 | ||
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 101 | 119 | 19 | – | – | |
| Phobius | 120 | 130 | 11 | – | – | |
| Phobius | 131 | 151 | 21 | – | – | |
| Phobius | 152 | 162 | 11 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 163 | 186 | 24 | – | – | |
| Phobius | 187 | 197 | 11 | – | – | |
| Phobius | 198 | 223 | 26 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 224 | 234 | 11 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 235 | 256 | 22 | – | – | |
| Phobius | 257 | 265 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj6g3v0920070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0920070.1, powered by CORGI.
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