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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1049120 |
| Transcript ID | Lj6g3v1049120.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: preprotein translocase subunit secY, chloroplastic-like [Glycine max] gi|356517020|ref|XP_003527188.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 128 | 128 | – | – | |
| PANTHER | 89 | 397 | 309 | 4.40E-185 | – | |
| PANTHER | 89 | 397 | 309 | 4.40E-185 | ||
| SUPERFAMILY | 121 | 393 | 273 | 5.36E-65 | ||
| Gene3D | 122 | 391 | 270 | 3.10E-77 | ||
| PRINTS | 129 | 147 | 19 | 1.20E-52 | – | |
| Phobius | 129 | 147 | 19 | – | – | |
| Phobius | 148 | 175 | 28 | – | – | |
| Phobius | 176 | 203 | 28 | – | – | |
| PRINTS | 179 | 199 | 21 | 1.20E-52 | – | |
| ProSitePatterns | 180 | 199 | 20 | – | ||
| Pfam | 181 | 391 | 211 | 4.30E-60 | ||
| Phobius | 204 | 223 | 20 | – | – | |
| PRINTS | 221 | 244 | 24 | 1.20E-52 | – | |
| Phobius | 224 | 243 | 20 | – | – | |
| TMHMM | 227 | 244 | 18 | – | – | |
| Phobius | 244 | 254 | 11 | – | – | |
| PRINTS | 253 | 278 | 26 | 1.20E-52 | – | |
| Phobius | 255 | 274 | 20 | – | – | |
| TMHMM | 255 | 274 | 20 | – | – | |
| ProSitePatterns | 272 | 289 | 18 | – | ||
| Phobius | 275 | 285 | 11 | – | – | |
| PRINTS | 279 | 302 | 24 | 1.20E-52 | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 286 | 303 | 18 | – | – | |
| Phobius | 304 | 314 | 11 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 315 | 335 | 21 | – | – | |
| Phobius | 336 | 399 | 64 | – | – | |
| PRINTS | 369 | 388 | 20 | 1.20E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v1049120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1049120.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.