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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1126410 |
| Transcript ID | Lj6g3v1126410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | DNA binding protein [Cucumis melo subsp]. melo] gi|307136199|gb|ADN34037.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 8 | 64 | 57 | 10.208 | ||
| Pfam | 12 | 49 | 38 | 1.40E-08 | ||
| PANTHER | 94 | 852 | 759 | 0 | – | |
| PANTHER | 94 | 852 | 759 | 0 | – | |
| ProSiteProfiles | 130 | 186 | 57 | 10.968 | ||
| Pfam | 134 | 171 | 38 | 3.70E-08 | ||
| MobiDBLite | 198 | 224 | 27 | – | – | |
| Coils | 218 | 238 | 21 | – | – | |
| Pfam | 346 | 497 | 152 | 2.90E-57 | ||
| SUPERFAMILY | 371 | 789 | 419 | 8.34E-52 | ||
| Pfam | 719 | 787 | 69 | 5.30E-12 | ||
| MobiDBLite | 875 | 902 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of Lj6g3v1126410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1126410.1, powered by CORGI.
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