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Lj6g3v1149670.1

Overview

Field Value
Gene ID Lj6g3v1149670
Transcript ID Lj6g3v1149670.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: AT-rich interactive domain-containing protein 4-like isoform X1 [Cicer arietinum] gi|502086233|ref|XP_004488152.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22970:SF21
6 505 500 0 –
PANTHER
PTHR22970
6 505 500 0 –
MobiDBLite
mobidb-lite
217 244 28 – –
SMART
SM01014
350 453 104 1.10E-13 –
ProSiteProfiles
PS51011
353 457 105 18.388
IPR001606
SUPERFAMILY
SSF46774
354 468 115 6.80E-16
IPR001606
Gene3D
G3DSA:1.10.150.60
354 461 108 6.70E-19
IPR001606
Pfam
PF01388
356 453 98 9.90E-15
IPR001606
Gene3D
G3DSA:3.30.40.10
462 489 28 2.40E-04
IPR013083

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 33

Expression data

Expression pattern

Expression pattern of Lj6g3v1149670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1149670.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.