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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1315120 |
| Transcript ID | Lj6g3v1315120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat protein soc-2 homolog [Glycine max] gi|356556262|ref|XP_003546445.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 42 | 277 | 236 | 3.10E-46 | ||
| SUPERFAMILY | 45 | 280 | 236 | 1.63E-42 | ||
| PANTHER | 46 | 274 | 229 | 1.10E-52 | – | |
| SMART | 64 | 83 | 20 | 19 | – | |
| SMART | 64 | 87 | 24 | 7.9 | ||
| ProSiteProfiles | 66 | 87 | 22 | 7.25 | ||
| Pfam | 67 | 122 | 56 | 2.40E-10 | ||
| SMART | 88 | 110 | 23 | 0.47 | ||
| SMART | 88 | 107 | 20 | 5.3 | – | |
| ProSiteProfiles | 90 | 111 | 22 | 8.32 | ||
| SMART | 111 | 134 | 24 | 1.4 | ||
| SMART | 111 | 130 | 20 | 4.8 | – | |
| ProSiteProfiles | 113 | 134 | 22 | 6.742 | ||
| SMART | 134 | 153 | 20 | 3.2 | – | |
| SMART | 135 | 157 | 23 | 140 | ||
| ProSiteProfiles | 136 | 157 | 22 | 6.287 | ||
| SMART | 158 | 177 | 20 | 140 | – | |
| SMART | 158 | 180 | 23 | 41 | ||
| ProSiteProfiles | 160 | 181 | 22 | 5.54 | ||
| SMART | 181 | 204 | 24 | 11 | ||
| SMART | 181 | 200 | 20 | 87 | – | |
| ProSiteProfiles | 183 | 205 | 23 | 5.332 | ||
| ProSiteProfiles | 206 | 229 | 24 | 5.409 | ||
| SMART | 229 | 248 | 20 | 6.2 | – | |
| SMART | 229 | 252 | 24 | 0.14 | ||
| ProSiteProfiles | 231 | 252 | 22 | 7.92 | ||
| ProSiteProfiles | 254 | 275 | 22 | 4.593 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1315120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1315120.1, powered by CORGI.
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